I've built a few pygmys and their instruction has you tape a syringe to a dowel, and line up a steel rod through 2 eyes (to push the plunger) to put the thickened epoxy in the seam. I found an old broom stick works pretty good to pack and smooth the epoxy in the seam. I like the surefiorm handled tool to clean up a day later. Pygmy puts glass tape as far as you can reach from the cockpit. Seems like a good idea for where you stress the kayak getting in and out. Note that it is best to get any excess out before it hardens. Use plenty of paper towels and a long sleeve shirt.

: I am asking this question in advance to avoid problems later on down the
: track.

: I am working on a guillemot stitch and glue boat. When the hull is stitched
: to the deck there is of course very limited access to the insides of the
: boat (assuming there is any at that stage of the build). The question is,
: how does one neatly fillet and then glass the seams of the boat with the
: hull and deck attached to each other. Is it best to do the hull and deck
: separately using guides, or is it best to cut out the hatches and cockpit
: from the deck, stitch it all together and then glue and glass the inside
: seams?

: I am thinking that perhaps i should stitch it all together, build rough
: guides (half guides, for deck and hull) then sand and cut away at them
: until they fit exactly. In that case i should be able to remove the deck
: and hull and work on them individually. (once the deck and hull are done,
: ill have to cut the hatches and cockpit out anyway to glue them together
: :/